dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004490_19|CGC1
Gene ID: MGYG000004490_01793
Location and strand information: 31228 - 32874 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3619
Protein molecular weight: 60673.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004490_19|CGC1
Gene ID: MGYG000004490_01794
Location and strand information: 32886 - 33203 (-)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000004490_19|CGC1
Gene ID: MGYG000004490_01795
Location and strand information: 33316 - 35757 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 6.8559
Protein molecular weight: 92019.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004490_19|CGC1
Gene ID: MGYG000004490_01796
Location and strand information: 35789 - 38416 (+)
Family: null
Protein type: null
Protein description: Valine--tRNA ligase

Gene clsuter ID: MGYG000004490_19|CGC1
Gene ID: MGYG000004490_01797
Location and strand information: 38425 - 39654 (+)
Family: GH8|CE15
Protein type: CAZyme
Protein description: Multidomain esterase
Protein isoelectric point: 4.4587
Protein molecular weight: 45601.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004490_19|CGC1
Gene ID: MGYG000004490_01798
Location and strand information: 39651 - 40298 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004490_19|CGC1
Gene ID: MGYG000004490_01799
Location and strand information: 40416 - 41630 (+)
Family: 9.B.10.1.1
Protein type: TC
Protein description: Putative metal chaperone YciC

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004490_01793	hypothetical protein	CAZyme	31228	32874	-	CE12
MGYG000004490_01794	L-rhamnose mutarotase	null	32886	33203	-	rhaM
MGYG000004490_01795	Beta-galactosidase BoGH2A	CAZyme	33316	35757	+	GH2
MGYG000004490_01796	Valine--tRNA ligase	null	35789	38416	+	tRNA-synt_1\| Anticodon_1\| Val_tRNA-synt_C
MGYG000004490_01797	Multidomain esterase	CAZyme	38425	39654	+	GH8\| CE15
MGYG000004490_01798	hypothetical protein	null	39651	40298	-	OMP_b-brl_2
MGYG000004490_01799	Putative metal chaperone YciC	TC	40416	41630	+	9.B.10.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature